CDS

Accession Number TCMCG051C25184
gbkey CDS
Protein Id XP_024462585.1
Location 4416278..4418344
Gene LOC7462085
GeneID 7462085
Organism Populus trichocarpa

Protein

Length 688aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024606817.1
Definition U-box domain-containing protein 1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description RING-type E3 ubiquitin transferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0002237        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002683        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005102        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009608        [VIEW IN EMBL-EBI]
GO:0009609        [VIEW IN EMBL-EBI]
GO:0009610        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009877        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033612        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036377        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043066        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050777        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070696        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGTAGTTCTTCCTCCTATCATGATCTCCTCAGGTTTAATGCCAACTGGGTCTTTGATGAAATCGTTGATTCATATATCCAATGAAGTTGCATCAGTGGAAAAGCTTCCTTTTTCACAGTTTAGGAACATTTCAACCATGATAAGGAGGATCAAGTTTCTTTCTTTTTTGTTTGAAGATATAAGGGAAACAAATAGCCCACTTCCTCCATCTTCCCTCCTGTGTCTCACCGAGCTCTTTTCTGTGATCCAAAGAGTCAAGCTTTTGATTCAACGGTGCAAGGGTGGTAGCTCTCTTTGGGGTCTTATACAGACAGAGTTTTTATCTAATCAATTCCATGCGCTAGTGAAGGAGATGGGCGGGGCACTTGATATTCTTCCTTTAAACTTGCTTAATTTAAGCACCGACACAAGAGAGCAAGTTGAACTTCTTCACAAGCAAGCAAAGAGGGTTGATTTGCTTGTTGACCCTCAAGAACTTCAAAGAAGAGAGGAGCTTCTACAAATAATGGCCAGCAATAATCAGAAGAACAGCAGGAACAAGGGATTCGTTGATTTTGTCAAAGTGAAAGAAGTTTTCAGCTGCATTGGTTTGAGAAGTCCATTGGATTATGAAGAAGAAATTTCGAAGCTTGAGGCAGAAGCGGAGAAGCAGGCTGGCACGGGAGGACTGATTGTGGTTTCCAATATAAACAATCTCATCTCTCTGGTAACATATTCCAAGTCCGTGATTTTTATTGACAGACATGAAGAGGAGATCAAAGAAAACTTCAAGCAGCTGTCTGCGTCCATGAATAGAAATCAGGATGTTTCTTCATCTTCTCAGTCAATACTTCCAAATATACCAGATGAATTCCGGTGCCCTATTTCCCTTGATTTGATGAAAGACCCTGTGATAGTTGCATCTGGGCACACTTACGATCGCAATTCAATTGCTCAGTGGATCAACTCAGGGCATCATACGTGTCCTAAGAGTGGGAAAAGACTAATTCACACTGCCCTGATACCTAATTATGCACTGAAGAGTCTGGTGCATCAGTGGTGCCAAGATAACAATGTCCCATTAATAGAGAATTCAACTTCTTCTTCCTCAAAATTTGAGAGAAGCAGCAGCAAGAGCAAATTAAGTGAGAAAGCTATTGAACACATTTCTGCTACAAAAGCTGCCATGGATGCAGTGAAAATGACAGCTGAATTTTTGGTCGGTAAGCTAGCAATGGGATCCCCAGAAATTCAACGGCAGGCGGCTTATGAGCTAAGATTATTAGCAAAGACTGGAATGGATAACCGCAAGATAATTGCTGAGGCAGGAGCCATACCCTTTCTGGTGACATTACTGAGTTCCACTGATCCAAGAATTCAAGAAAATGCAGTCACTGCCTTGCTTAACCTTTCCATATTTGACAACAACAAGATATTAATTATGGCTGCTGGTTCAATTGACAGCATAATAAATGTTCTTGAATCAGGGAAAACTATGGAGGCAAGAGAAAATGCAGCAGCAACAATCTTTAGCCTGTCGATCATAAGCGATTGTAAGGTGACTATAGGAACCCGTCCTAGAGCATTCTCCGCCTTGGTTGGGCTTCTGAGAGAAGGCACAGCCACTGGAAAAAAGGATGCTGCAAGTGCACTATTCAATCTGTCAGTCTATAATGCTAACAAGGCAAGTGTTGTTGTTGCTGGGGCAGTTCCTTTGCTCATTGAATTATTGATGGATGACAAGGCAGGCATAACAGATGATGCCTTGGCATTGCTGGCTCTGCTTTCGGGTTGCTCTGAAGGGCTGGAGGAGATAAGACAGAGCAGAATTCTTATGCCTATGGTTATAGATCTCTTGAGATTTGGATCCACCAAAGGGAAGGAGAACTCGATAACTCTGTTGCTGGGGCTGTGCAAAGATGGAGGAGAGGAGGTTGCAAGGCGTCTGTTAATAAATCCGAGAAGTATTCCTTCCCTTCAAAGCTTGTCCACAGATGGTTCTCTAAAAGCCAGAAGAAAAGCTGATGCATTGCTCAGATTACTGAATAGGTGCTGCTCCCAATCCCACAATCCTGTTGGATAA
Protein:  
MDVVLPPIMISSGLMPTGSLMKSLIHISNEVASVEKLPFSQFRNISTMIRRIKFLSFLFEDIRETNSPLPPSSLLCLTELFSVIQRVKLLIQRCKGGSSLWGLIQTEFLSNQFHALVKEMGGALDILPLNLLNLSTDTREQVELLHKQAKRVDLLVDPQELQRREELLQIMASNNQKNSRNKGFVDFVKVKEVFSCIGLRSPLDYEEEISKLEAEAEKQAGTGGLIVVSNINNLISLVTYSKSVIFIDRHEEEIKENFKQLSASMNRNQDVSSSSQSILPNIPDEFRCPISLDLMKDPVIVASGHTYDRNSIAQWINSGHHTCPKSGKRLIHTALIPNYALKSLVHQWCQDNNVPLIENSTSSSSKFERSSSKSKLSEKAIEHISATKAAMDAVKMTAEFLVGKLAMGSPEIQRQAAYELRLLAKTGMDNRKIIAEAGAIPFLVTLLSSTDPRIQENAVTALLNLSIFDNNKILIMAAGSIDSIINVLESGKTMEARENAAATIFSLSIISDCKVTIGTRPRAFSALVGLLREGTATGKKDAASALFNLSVYNANKASVVVAGAVPLLIELLMDDKAGITDDALALLALLSGCSEGLEEIRQSRILMPMVIDLLRFGSTKGKENSITLLLGLCKDGGEEVARRLLINPRSIPSLQSLSTDGSLKARRKADALLRLLNRCCSQSHNPVG